Escherichia coli ETEC H10407

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli ETEC H10407 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is part of the Enterotoxigenic E. coli (ETEC) pathotype, which is often associated with gastrointestinal infections in humans. E. coli H10407 thrives optimally at 37°C, reflecting its adaptation to the warm-blooded hosts it inhabits. As a facultative anaerobe, it possesses the ability to grow in both aerobic and anaerobic environments, which aids its survival within the diverse conditions found in the intestinal tract. This strain's habitat is primarily host-associated, indicating its reliance on living hosts for sustenance and propagation. The ability to exist in pairs or as singles may facilitate its colonization and interaction with host tissues, although specific mechanisms of attachment and virulence are not detailed in the provided traits. Understanding the characteristics of E. coli ETEC H10407 can offer insights into its ecological role within the intestinal microbiome and its potential impact on host health. Its facultative anaerobic nature suggests a versatile metabolic capacity, allowing it to adapt to varying oxygen levels and compete with other microbial inhabitants in the gut environment. Such adaptability may contribute to its persistence and the dynamics of microbial communities in host-associated habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainETEC H10407

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli ETEC H10407
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli ETEC H10407


Gene Summary

Adenine Count

25007 bp

Thymine Count

25318 bp

Guanine Count

21914 bp

Cytosine Count

22558 bp

Genome Length

94797 bp

Protein-coding Genes

103 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine protease autotransporter toxin eataETEC_RS26520Not AvailableNegative1202 - 5296147705.0
is3-like element is911 family transposaseETEC_RS30330Not AvailableNegative6018 - 641814750.2
is3 family transposaseETEC_RS26530Not AvailableNegative6589 - 780246090.0
is3-like element is911 family transposaseETEC_RS26540Not AvailablePositive7898 - 837117598.9
is3-like element is911 family transposaseETEC_RS26545Not AvailablePositive8525 - 87498941.09
is256-like element is1414 family transposaseETEC_RS26550Not AvailablePositive8826 - 1003445775.2
duf2919 family proteinETEC_RS26555Not AvailableNegative10143 - 1063719114.5
hypothetical proteinETEC_RS26560Not AvailableNegative10634 - 1254772048.3
hypothetical proteinETEC_RS26565Not AvailableNegative12619 - 128046362.38
filamentous hemagglutinin n-terminal domain-containing proteinETEC_RS30895Not AvailableNegative12829 - 17448154474.0

Displaying genes 1 – 10 of 5342 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.