Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s6--l-glutamate ligaseVSAL_RS04240B6EH18Negative849441 - 85034632392.6
atp-dependent zinc proteaseVSAL_RS04245Q6AKK4Negative850346 - 85078616821.4
sodium-dependent transporterVSAL_RS04250O34383Positive851281 - 85264549674.2
hypothetical proteinVSAL_RS23745Q5E183Negative852737 - 85312614218.1
ydcf family proteinVSAL_RS04310Not AvailableNegative862454 - 86346738622.2
redoxin domain-containing proteinVSAL_RS04315Not AvailableNegative863578 - 86403917501.2
n-acetylmuramoyl-l-alanine amidaseVSAL_RS04320P75820Negative864223 - 86502029714.3
hypothetical proteinVSAL_RS04325Not AvailableNegative865267 - 86564414460.4
hypothetical proteinVSAL_RS04330Not AvailableNegative865634 - 8658498444.25
peptidaseVSAL_RS04335Not AvailableNegative865839 - 86623714900.3

Displaying genes 971 – 980 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.