Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylformylglycinamidine synthaseVSAL_RS04190Q5E749Positive837821 - 841750142876.0
nifb/nifx family molybdenum-iron cluster-binding proteinVSAL_RS04195Not AvailablePositive841990 - 84246017267.4
(na+)-nqr maturation nqrmVSAL_RS04200Not AvailablePositive842457 - 8426607574.72
duf134 domain-containing proteinVSAL_RS04205Q87JD1Negative842678 - 84295310141.4
rna methyltransferaseVSAL_RS04210Not AvailablePositive843130 - 84364518894.6
duf3332 family proteinVSAL_RS04215Not AvailablePositive843716 - 84425219488.5
duf3622 domain-containing proteinVSAL_RS04220Not AvailablePositive844660 - 84498612711.6
ig-like domain-containing proteinVSAL_RS04225P27050Negative845055 - 84759589757.0
grea/greb family elongation factorVSAL_RS04230Not AvailablePositive847829 - 84831717987.5
succinylglutamate desuccinylase/aspartoacylase family proteinVSAL_RS04235Not AvailableNegative848387 - 84948139918.4

Displaying genes 961 – 970 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.