Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yqcc family proteinVSAL_RS04000Not AvailablePositive798705 - 79902511828.4
trna pseudouridine(65) synthase trucVSAL_RS04005Q87MD4Positive799058 - 79981328897.7
inositol-1-monophosphataseVSAL_RS04010Q9KTY5Negative799918 - 80072129696.7
trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmjVSAL_RS04015Q2NS29Positive800930 - 80165826851.4
fe-s cluster assembly transcriptional regulator iscrVSAL_RS04020B6EGX4Positive801764 - 80227017960.6
iscs subfamily cysteine desulfuraseVSAL_RS04025A7MU48Positive802302 - 80351644981.7
fe-s cluster assembly scaffold iscuVSAL_RS04030P0ACD6Positive803550 - 80392713409.0
iron-sulfur cluster assembly protein iscaVSAL_RS04035C5BEU3Positive804048 - 80437111681.8
co-chaperone hscbVSAL_RS04040B6EGX8Positive804387 - 80490219783.3
fe-s protein assembly chaperone hscaVSAL_RS04045B6EGX9Positive804938 - 80679165875.5

Displaying genes 921 – 930 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.