Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf423 domain-containing proteinVSAL_RS03900P45019Positive777840 - 77822613798.2
23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmmVSAL_RS03905B6EGG2Positive778223 - 77931441831.6
flap endonuclease xniVSAL_RS03910B6EGG3Negative779521 - 78029429286.0
nucleotide 5'-monophosphate nucleosidase ppnnVSAL_RS03915P0ADS0Negative780377 - 78173550409.9
ggdef domain-containing proteinVSAL_RS03920Q9HT84Negative781864 - 78342660014.0
lipopolysaccharide assembly protein lapbVSAL_RS03925Not AvailableNegative783603 - 78582585382.6
nadph-dependent 7-cyano-7-deazaguanine reductase quefVSAL_RS03930B6EGG7Negative785945 - 78679032287.2
secy-interacting proteinVSAL_RS03935B6EGG8Positive786899 - 78744720631.7
zn-ribbon-containing proteinVSAL_RS03940P44154Positive787551 - 78832429470.9
yaii/yqxd family proteinVSAL_RS03945B6EGH0Negative788386 - 78884116606.1

Displaying genes 901 – 910 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.