Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Isppu15, transposase orf1VSAL_RS23340Not AvailableNegative854921 - 8551489025.85
is66 family insertion sequence element accessory protein tnpaVSAL_RS04270Not AvailableNegative855265 - 85557911871.4
duf2635 domain-containing proteinVSAL_RS22540Not AvailableNegative855657 - 8558065786.18
phage virion morphogenesis proteinVSAL_RS04275Not AvailableNegative855807 - 85633720476.6
phage tail proteinVSAL_RS04280Not AvailableNegative856328 - 85680117561.6
head completion/stabilization proteinVSAL_RS04285Not AvailableNegative856805 - 85725416572.6
Major capsid proteinVSAL_RS04290P25477Negative857360 - 85839438081.7
Capsid-scaffolding proteinVSAL_RS04295P51719Negative858446 - 85931831848.2
Hypothetical proteinVSAL_RS04300P51718Positive859478 - 86124467259.1
Phage portal vertex proteinVSAL_RS24225Not AvailablePositive861286 - 86223435039.9

Displaying genes 81 – 90 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.