Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
murein transglycosylaseVSAL_RS03700P39434Positive730675 - 73260974019.4
trp operon repressorVSAL_RS03705B6EGC9Positive732680 - 73300611943.2
inosine/xanthosine triphosphataseVSAL_RS03710B5FAQ4Negative732975 - 73348718405.0
prephenate dehydrataseVSAL_RS03715Q02286Negative733504 - 73467944061.7
ribosome hibernation-promoting factor, hpf/yfia familyVSAL_RS03720P71346Negative734792 - 73515413722.3
outer membrane protein assembly factor bamdVSAL_RS03725Q9KU21Negative735514 - 73623927792.9
23s rrna pseudouridine(1911/1915/1917) synthase rludVSAL_RS03730Q87S65Positive736402 - 73737636549.4
peptidoglycan editing factor pgefVSAL_RS03735P44552Positive737376 - 73811026765.6
atp-dependent chaperone clpbVSAL_RS03740Q9KU18Positive738205 - 74079096296.0
16s ribosomal rnaNot AvailableNot AvailablePositive741255 - 742799Not Available

Displaying genes 861 – 870 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.