Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
signal recognition particle proteinVSAL_RS03650P0AGD9Positive721225 - 72261050511.4
30s ribosomal protein s16VSAL_RS03655Q5E7F2Positive722872 - 7231209141.06
ribosome maturation factor rimmVSAL_RS03660B6EGC0Positive723147 - 72367420040.9
trna (guanosine(37)-n1)-methyltransferase trmdVSAL_RS03665B6EGC1Positive723697 - 72444627790.1
50s ribosomal protein l19VSAL_RS03670B6EGC2Positive724487 - 72484013272.2
3-deoxy-7-phosphoheptulonate synthaseVSAL_RS03675P0A1B6Positive725054 - 72612739326.8
bifunctional chorismate mutase/prephenate dehydrogenaseVSAL_RS03680Q02287Positive726134 - 72726742544.6
m23 family metallopeptidaseVSAL_RS03685P44693Negative727315 - 72832838262.0
pilz domain-containing proteinVSAL_RS03690Q9HVI1Negative728351 - 72871313897.9
mate family efflux transporterVSAL_RS03695P45127Negative728827 - 73049060383.5

Displaying genes 851 – 860 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.