Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxaloacetate decarboxylase subunit gammaVSAL_RS03600Q8DC44Positive709310 - 7095619209.69
sodium-extruding oxaloacetate decarboxylase subunit alphaVSAL_RS03605Q8XGX8Positive709599 - 71138664451.2
sodium ion-translocating decarboxylase subunit betaVSAL_RS03610Q9KTU5Positive711398 - 71252839231.5
yqaa family proteinVSAL_RS03615P0ADR0Positive712625 - 71305615695.5
pitrilysin family proteinVSAL_RS03620P55679Positive713065 - 715917105523.0
glutamate--cysteine ligaseVSAL_RS03625B6EGB3Positive716044 - 71760959106.9
hypothetical proteinVSAL_RS03630Not AvailablePositive717676 - 71827522946.0
s-ribosylhomocysteine lyaseVSAL_RS03635B6EGB5Positive718309 - 71882719055.9
hlyc/corc family transporterVSAL_RS03640P37908Negative718895 - 72016647171.6
inner membrane protein ypjdVSAL_RS03645P64434Negative720268 - 72106229519.2

Displaying genes 841 – 850 of 4514 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.