Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbamoyl-phosphate synthase large subunitVSAL_RS03300Q87SF3Positive644631 - 647861117786.0
serine-type d-ala-d-ala carboxypeptidaseVSAL_RS03305P45161Negative647963 - 64937251621.8
porinVSAL_RS03310Q87LZ1Negative649514 - 65051535479.5
transcription elongation factor greaVSAL_RS03315Q87LZ2Positive651098 - 65157117487.0
ribosome assembly rna-binding protein yhbyVSAL_RS03320P0AGK6Negative651666 - 65196211040.7
23s rrna (uridine(2552)-2'-o)-methyltransferase rlmeVSAL_RS03325B6END5Positive652081 - 65271023281.0
atp-dependent zinc metalloprotease ftshVSAL_RS03330Q6LUJ8Positive652796 - 65477872954.1
dihydropteroate synthaseVSAL_RS03335P0AC14Positive654843 - 65567630432.9
phosphoglucosamine mutaseVSAL_RS03340B6END8Positive655733 - 65707047789.9
preprotein translocase subunit secgVSAL_RS03345P0AGA1Positive657222 - 65755411344.7

Displaying genes 781 – 790 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.