Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metalloregulator arsr/smtb family transcription factorVSAL_RS03250P52695Positive633634 - 63393011058.5
30s ribosomal protein s20VSAL_RS03255B6EMY3Negative634052 - 6343129475.71
murein biosynthesis integral membrane protein murjVSAL_RS03260O34238Positive634534 - 63609356828.4
bifunctional riboflavin kinase/fad synthetaseVSAL_RS03265P44957Positive636184 - 63711634949.4
isoleucine--trna ligaseVSAL_RS03270B6EMY6Positive637153 - 640011106904.0
signal peptidase iiVSAL_RS03275A5F8Z4Positive640011 - 64052619497.7
fkbp-type peptidyl-prolyl cis-trans isomeraseVSAL_RS03280P0AEM2Positive640621 - 64105215112.7
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseVSAL_RS03285B6ENC7Positive641077 - 64202134766.6
4-hydroxy-tetrahydrodipicolinate reductaseVSAL_RS03290B6ENC8Positive642091 - 64290028749.6
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunitVSAL_RS03295Q7MNU1Positive643459 - 64461341497.3

Displaying genes 771 – 780 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.