Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysine--trna ligaseVSAL_RS03200B6EMX2Positive621111 - 62261656877.0
sigma-54 dependent transcriptional regulatorVSAL_RS03205P14375Positive623013 - 62435049927.8
dna mismatch repair endonuclease muthVSAL_RS03210Q6LUM6Negative624417 - 62508524839.9
rna pyrophosphohydrolaseVSAL_RS03215B6EMX5Positive625679 - 62619120349.5
phosphoenolpyruvate--protein phosphotransferaseVSAL_RS03220P37178Positive626228 - 62848984519.3
sulfite exporter taue/safe family proteinVSAL_RS03225P44070Positive628490 - 62929327648.4
prolipoprotein diacylglyceryl transferaseVSAL_RS03230B6EMX8Positive629304 - 63015531952.2
thymidylate synthaseVSAL_RS03235Q5E7P1Positive630240 - 63109132447.6
na/pi symporterVSAL_RS03240O97704Negative631160 - 63230540261.9
transcriptional activator nharVSAL_RS03245P52692Positive632681 - 63358334103.0

Displaying genes 761 – 770 of 4514 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.