Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Vibrionales
Family	Vibrionaceae
Genus	Aliivibrio
Species	Aliivibrio salmonicida
Strain	LFI1238

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	No
Flagellar presence	Yes
Number of membranes	2

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Facultative
Optimal temperature	Not Available
Temperature range	Psychrophilic
Habitat	Aquatic
Biotic relationship	Free living
Host(s)	Gadus morhua
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Heterotroph
Pathogenicity	No

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
phosphoglycerate kinase	VSAL_RS03150	B6EMW2	Positive	609091 - 610254	40627.9
class ii fructose-bisphosphate aldolase	VSAL_RS03155	P0AB72	Positive	610409 - 611485	38449.3
atp-dependent rna helicase srmb	VSAL_RS03160	P21507	Negative	611726 - 612976	47025.1
trna1(val) (adenine(37)-n6)-methyltransferase	VSAL_RS03165	B6EMW5	Negative	613065 - 613769	26575.2
branched-chain amino acid transport system ii carrier protein	VSAL_RS03170	Not Available	Positive	614058 - 615371	46347.4
flavodoxin fldb	VSAL_RS03175	P0ABY6	Negative	615500 - 616018	19445.5
site-specific tyrosine recombinase xerd	VSAL_RS03180	Q7ZAJ0	Positive	616161 - 617057	34609.7
bifunctional protein-disulfide isomerase/oxidoreductase dsbc	VSAL_RS03185	P55890	Positive	617137 - 617913	28409.0
single-stranded-dna-specific exonuclease recj	VSAL_RS03190	P21893	Positive	617993 - 619732	63730.2
peptide chain release factor 2	VSAL_RS03195	Q5E7P9	Positive	619999 - 621097	41130.9