Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna (guanosine(46)-n7)-methyltransferase trmbVSAL_RS03050B6EMU1Positive591105 - 59182126926.2
glutaminase bVSAL_RS03055B6EMU2Positive591928 - 59284833484.4
radical sam family heme chaperone hemwVSAL_RS03060P52062Negative592953 - 59411344338.7
xtp/ditp diphosphataseVSAL_RS03065Q87LJ1Negative594117 - 59471321547.4
duf4426 domain-containing proteinVSAL_RS03070Not AvailableNegative594724 - 59515515995.4
mate family efflux transporterVSAL_RS03075A8FSL7Negative595184 - 59547810762.0
yggt family proteinVSAL_RS03080P52059Negative595507 - 59606120407.0
pyrroline-5-carboxylate reductaseVSAL_RS03085P52053Negative596137 - 59695529120.0
yggs family pyridoxal phosphate-dependent enzymeVSAL_RS03090P52055Negative596942 - 59770928361.7
type iv pilus twitching motility protein piltVSAL_RS03095P24559Positive597733 - 59877038235.1

Displaying genes 731 – 740 of 4514 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.