Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyl hydrolase 2 galactose-binding domain-containing proteinVSAL_RS02950Not AvailablePositive577288 - 57812432081.1
valine--trna ligaseVSAL_RS02955Q6LUW1Negative578281 - 581142108315.0
dna polymerase iii subunit chiVSAL_RS02960P28905Negative581253 - 58169616658.9
leucyl aminopeptidaseVSAL_RS02965B6EMT2Negative581790 - 58329854608.6
lps export abc transporter permease lptfVSAL_RS02970P0AFA0Positive583488 - 58460041011.9
lps export abc transporter permease lptgVSAL_RS02975P0ADC7Positive584593 - 58566939780.2
rdd family proteinVSAL_RS02980Not AvailableNegative585746 - 58621017323.3
Trna-leuNot AvailableNot AvailablePositive586390 - 586474Not Available
duf2999 domain-containing proteinVSAL_RS02990Not AvailableNegative586622 - 5868799509.68
diacylglycerol kinaseVSAL_RS02995P0ABN3Negative586955 - 58734113830.3

Displaying genes 711 – 720 of 4514 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.