Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Vibrionales
Family	Vibrionaceae
Genus	Aliivibrio
Species	Aliivibrio salmonicida
Strain	LFI1238

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	No
Flagellar presence	Yes
Number of membranes	2

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Facultative
Optimal temperature	Not Available
Temperature range	Psychrophilic
Habitat	Aquatic
Biotic relationship	Free living
Host(s)	Gadus morhua
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Heterotroph
Pathogenicity	No

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
type ii secretion system protein	VSAL_RS02705	Not Available	Positive	532892 - 533365	15954.1
type ii secretion system protein	VSAL_RS02710	Not Available	Positive	533617 - 534087	16060.1
type ii secretion system protein	VSAL_RS02715	Not Available	Positive	534214 - 534828	22314.9
prepilin-type n-terminal cleavage/methylation domain-containing protein	VSAL_RS02720	Not Available	Positive	534825 - 535418	21516.0
pilw family protein	VSAL_RS02725	Not Available	Positive	535418 - 536173	27706.7
hypothetical protein	VSAL_RS02730	Not Available	Positive	536163 - 536597	15553.7
hypothetical protein	VSAL_RS02735	Not Available	Positive	536597 - 538105	56358.0
duf6701 domain-containing protein	VSAL_RS02740	Not Available	Positive	538018 - 540891	103867.0
rod shape-determining protein	VSAL_RS02745	P0A9X5	Positive	541014 - 542057	36901.4
rod shape-determining protein mrec	VSAL_RS02750	P16926	Positive	542080 - 542937	32035.7