Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Vibrionales
Family	Vibrionaceae
Genus	Aliivibrio
Species	Aliivibrio salmonicida
Strain	LFI1238

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	No
Flagellar presence	Yes
Number of membranes	2

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Facultative
Optimal temperature	Not Available
Temperature range	Psychrophilic
Habitat	Aquatic
Biotic relationship	Free living
Host(s)	Gadus morhua
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Heterotroph
Pathogenicity	No

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
hypothetical protein	VSAL_RS02595	Not Available	Negative	511007 - 512389	51893.8
is630-like element isvsa8 family transposase	VSAL_RS22660	Not Available	Negative	512441 - 513447	38982.9
wzz/fepe/etk n-terminal domain-containing protein	VSAL_RS02610	Not Available	Negative	513549 - 514313	29116.2
polysaccharide biosynthesis/export family protein	VSAL_RS02615	Q48450	Negative	514317 - 514898	21227.3
outer membrane beta-barrel protein	VSAL_RS02620	Not Available	Negative	514899 - 516161	48729.1
mate family efflux transporter	VSAL_RS02625	Not Available	Negative	516193 - 517606	51288.4
single-stranded dna-binding protein	VSAL_RS02630	Q87LA3	Positive	517928 - 518479	20226.5
hypothetical protein	VSAL_RS02635	Not Available	Negative	518552 - 519124	21439.8
is630-like element isvsa8 family transposase	VSAL_RS22665	Not Available	Negative	519233 - 520239	38982.9
rnase e specificity factor csrd	VSAL_RS02650	P13518	Positive	520546 - 522531	75343.3