Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr03899 family proteinVSAL_RS02400Not AvailableNegative461248 - 46214433842.9
duf3299 domain-containing proteinVSAL_RS02405Not AvailableNegative462468 - 46295318154.2
abc transporter permeaseVSAL_RS02410Not AvailableNegative462963 - 46422246184.2
abc transporter atp-binding proteinVSAL_RS02415Q58206Negative464216 - 46490525785.8
duf2796 domain-containing proteinVSAL_RS02420Not AvailableNegative464942 - 46558324000.4
duf2607 family proteinVSAL_RS22650Not AvailableNegative465635 - 46592510790.0
ytfj family proteinVSAL_RS02425P39187Negative465991 - 46654220164.9
duf1107 domain-containing proteinVSAL_RS02430P0ADE3Positive466791 - 4670008042.02
peptide-methionine (s)-s-oxide reductase msraVSAL_RS02435Q6LV65Negative467069 - 46764721741.6
autotransporter assembly complex family proteinVSAL_RS02440D2TN56Positive467761 - 46948264304.5

Displaying genes 601 – 610 of 4514 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.