Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is630-like element isvsa8 family transposaseVSAL_RS22645Not AvailablePositive431804 - 43281038964.8
dart ssdna thymidine adp-ribosyltransferase family proteinVSAL_RS02255Not AvailableNegative432811 - 43317013892.5
helicase repa family proteinVSAL_RS02260Not AvailableNegative433433 - 43449439029.9
site-specific integraseVSAL_RS02265P10487Negative434540 - 43560140563.9
tyrosine-type recombinase/integraseVSAL_RS02270P45198Negative435736 - 43680640842.7
trna dihydrouridine(20/20a) synthase dusaVSAL_RS02275Q8CWK7Positive437014 - 43803037972.6
tigr04219 family outer membrane beta-barrel proteinVSAL_RS02280Not AvailablePositive438149 - 43884725835.9
hypothetical proteinVSAL_RS02285Not AvailablePositive438993 - 4392238571.32
assimilatory sulfite reductase (nadph) flavoprotein subunitVSAL_RS02290Q5E841Positive439358 - 44118167496.3
assimilatory sulfite reductase (nadph) hemoprotein subunitVSAL_RS02295B6ELM5Positive441181 - 44291164573.9

Displaying genes 571 – 580 of 4514 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.