Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf547 domain-containing proteinVSAL_RS02145Not AvailableNegative408841 - 40962030408.9
3-isopropylmalate dehydratase small subunitVSAL_RS02150B6ELJ7Negative409804 - 41040622464.6
3-isopropylmalate dehydratase large subunitVSAL_RS02155B6ELJ8Negative410418 - 41183350463.2
3-isopropylmalate dehydrogenaseVSAL_RS02160Q5E857Negative411849 - 41294039295.9
2-isopropylmalate synthaseVSAL_RS02165B6ELK0Negative413018 - 41456556213.9
tetr/acrr family transcriptional regulatorVSAL_RS23740Not AvailablePositive415046 - 41545015575.0
efflux rnd transporter periplasmic adaptor subunitVSAL_RS02175Not AvailablePositive415681 - 41700048943.4
efflux rnd transporter permease subunitVSAL_RS02180A1JKW9Positive416997 - 420101114159.0
ydiy family proteinVSAL_RS02185Not AvailableNegative420124 - 42084626916.8
replicative dna helicaseVSAL_RS02190Q8FB22Positive421307 - 42270451849.7

Displaying genes 551 – 560 of 4514 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.