Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
obg family gtpase cgtaVSAL_RS02095B6EL43Positive397929 - 39910742834.7
threonine/serine exporter thre family proteinVSAL_RS02100P0ADD5Positive399232 - 39999927883.4
threonine/serine exporter family proteinVSAL_RS02105C6DEZ3Positive399999 - 40049017882.8
type 3 dihydrofolate reductaseVSAL_RS02110P12833Positive400556 - 40107719374.2
symmetrical bis(5'-nucleosyl)-tetraphosphataseVSAL_RS02115B6EL47Negative401288 - 40210931307.4
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaVSAL_RS02120B6EL48Negative402206 - 40303931450.2
4-hydroxythreonine-4-phosphate dehydrogenase pdxaVSAL_RS02125Q87ST5Negative403036 - 40402535522.9
peptidylprolyl isomerase suraVSAL_RS02130Q5E863Negative404018 - 40532848868.3
lps assembly protein lptdVSAL_RS02135Q5E862Negative405399 - 40775388855.6
co-chaperone djlaVSAL_RS02140Q5E861Positive407960 - 40881131178.5

Displaying genes 541 – 550 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.