Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pseudouridine synthaseVSAL_RS02045Q87LD3Positive387207 - 38794128039.6
universal stress proteinVSAL_RS02050Not AvailableNegative388002 - 38843916119.8
trap transporter permeaseVSAL_RS02055Not AvailableNegative388495 - 39107492639.2
taxi family trap transporter solute-binding subunitVSAL_RS02060Not AvailableNegative391308 - 39228234635.2
mate family efflux transporterVSAL_RS02065Not AvailablePositive392708 - 39401447969.6
transcriptional regulator argrVSAL_RS02070Q5E876Negative394047 - 39451717271.0
malate dehydrogenaseVSAL_RS02075B6EL39Positive394789 - 39572432164.0
octaprenyl diphosphate synthaseVSAL_RS02080P0AD57Negative395817 - 39678835053.9
50s ribosomal protein l21VSAL_RS02085B6EL41Positive397065 - 39737611443.8
50s ribosomal protein l27VSAL_RS02090B6EL42Positive397394 - 3976519167.04

Displaying genes 531 – 540 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.