Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s4VSAL_RS01995B6EPU8Positive375161 - 37578123390.4
dna-directed rna polymerase subunit alphaVSAL_RS02000B6EPU9Positive375805 - 37679436372.6
50s ribosomal protein l17VSAL_RS02005B6EPV0Positive376831 - 37721114296.5
class 1 fructose-bisphosphataseVSAL_RS02010B6EPV3Negative377275 - 37828537290.1
udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligaseVSAL_RS02015P37773Positive378499 - 37986049812.2
flavin prenyltransferase ubixVSAL_RS02020Q9KP38Positive379862 - 38049122760.9
thiamine abc transporter substrate binding subunitVSAL_RS02025P31550Positive380696 - 38171237661.7
thiamine/thiamine pyrophosphate abc transporter permease thipVSAL_RS02030Q8ZRV1Positive381775 - 38339759411.6
thiamine abc transporter atp-binding proteinVSAL_RS02035Q5E882Positive383397 - 38407124896.6
rna polymerase-associated protein rapaVSAL_RS02040B6EPV7Positive384295 - 387204109204.0

Displaying genes 521 – 530 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.