Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s8VSAL_RS01945B6EPT9Positive370277 - 37066913997.3
50s ribosomal protein l6VSAL_RS01950B6EPU0Positive370682 - 37121518868.0
50s ribosomal protein l18VSAL_RS01955B6EPU1Positive371225 - 37157812669.3
30s ribosomal protein s5VSAL_RS01960B6EPU2Positive371593 - 37209317565.5
50s ribosomal protein l30VSAL_RS01965B6EPU3Positive372099 - 3722786705.48
50s ribosomal protein l15VSAL_RS01970B6EPU4Positive372285 - 37271914908.4
preprotein translocase subunit secyVSAL_RS01975P78283Positive372740 - 37407148418.4
50s ribosomal protein l36VSAL_RS01980Q5E893Positive374099 - 3742124304.59
30s ribosomal protein s13VSAL_RS01985Q5E892Positive374362 - 37471813226.3
30s ribosomal protein s11VSAL_RS01990Q5E891Positive374740 - 37512913892.8

Displaying genes 511 – 520 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.