Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s19VSAL_RS01895B6EPS9Positive366289 - 36656710485.1
50s ribosomal protein l22VSAL_RS01900B6EPT0Positive366578 - 36691012127.9
30s ribosomal protein s3VSAL_RS01905B6EPT1Positive366930 - 36762825616.3
50s ribosomal protein l16VSAL_RS01910B6EPT2Positive367640 - 36805015566.4
50s ribosomal protein l29VSAL_RS01915Q5E8A7Positive368050 - 3682417287.85
30s ribosomal protein s17VSAL_RS01920B6EPT4Positive368241 - 3684959652.93
50s ribosomal protein l14VSAL_RS01925B6EPT5Positive368658 - 36902913580.9
50s ribosomal protein l24VSAL_RS01930B6EPT6Positive369040 - 36935711390.9
50s ribosomal protein l5VSAL_RS01935B6EPT7Positive369385 - 36992420088.4
30s ribosomal protein s14VSAL_RS01940B6EPT8Positive369942 - 37024711512.1

Displaying genes 501 – 510 of 4514 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.