Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Vibrionales
Family	Vibrionaceae
Genus	Aliivibrio
Species	Aliivibrio salmonicida
Strain	LFI1238

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	No
Flagellar presence	Yes
Number of membranes	2

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Facultative
Optimal temperature	Not Available
Temperature range	Psychrophilic
Habitat	Aquatic
Biotic relationship	Free living
Host(s)	Gadus morhua
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Heterotroph
Pathogenicity	No

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
duf4123 domain-containing protein	VSAL_RS21905	Not Available	Positive	38530 - 39123	22447.1
lysm peptidoglycan-binding domain-containing protein	VSAL_RS21910	Not Available	Positive	39139 - 41583	90540.7
sumf1/egtb/pvdo family nonheme iron enzyme	VSAL_RS21915	Q9F3C7	Negative	41661 - 42728	40165.8
para family protein	VSAL_RS21920	P07620	Positive	43036 - 44232	45040.4
parb/repb/spo0j family partition protein	VSAL_RS22510	Not Available	Positive	44232 - 45239	36989.4
hypothetical protein	VSAL_RS21930	Not Available	Negative	45392 - 45667	10581.6
recombinase family protein	VSAL_RS21935	P03012	Negative	45731 - 46276	20277.3
hypothetical protein	VSAL_RS21940	Not Available	Negative	46692 - 46892	7525.2
recombinase family protein	VSAL_RS21945	Not Available	Negative	46932 - 47567	24330.5
is91-like element isvsa21 family transposase	VSAL_RS21950	P24607	Negative	47865 - 49046	45793.2