Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Vibrionales
Family	Vibrionaceae
Genus	Aliivibrio
Species	Aliivibrio salmonicida
Strain	LFI1238

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	No
Flagellar presence	Yes
Number of membranes	2

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Facultative
Optimal temperature	Not Available
Temperature range	Psychrophilic
Habitat	Aquatic
Biotic relationship	Free living
Host(s)	Gadus morhua
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Heterotroph
Pathogenicity	No

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
is982-like element isvsa6 family transposase	VSAL_RS01695	Not Available	Positive	333689 - 334570	33634.2
duf3135 domain-containing protein	VSAL_RS01700	Not Available	Negative	334579 - 334866	10837.9
class ii fructose-bisphosphatase	VSAL_RS01705	P0A9D0	Negative	335317 - 336324	35919.6
cell division protein zapb	VSAL_RS01710	B6EPL9	Positive	336692 - 336934	9076.71
is66 family insertion sequence element accessory protein tnpa	VSAL_RS01715	Not Available	Positive	337220 - 337534	11871.4
is66 family insertion sequence element accessory protein tnpb	VSAL_RS01720	Not Available	Positive	337531 - 337878	13682.5
is66-like element isvsa2 family transposase	VSAL_RS01725	Not Available	Positive	337950 - 339437	56615.9
ribonuclease e activity regulator rraa	VSAL_RS01730	Q9KNQ9	Negative	339695 - 340192	17883.1
1,4-dihydroxy-2-naphthoate polyprenyltransferase	VSAL_RS01735	P32166	Negative	340286 - 341194	32260.1
phosphoribulokinase	VSAL_RS01740	P0AEX5	Negative	341282 - 342151	32729.1