Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mbl fold metallo-hydrolase rna specificity domain-containing proteinVSAL_RS01595Q5SLP1Positive312237 - 31369154415.9
four helix bundle proteinVSAL_RS01600Not AvailablePositive313868 - 31421513230.3
tetr/acrr family transcriptional regulatorVSAL_RS01605Not AvailablePositive314332 - 31497624640.6
bama/tama family outer membrane proteinVSAL_RS01610Not AvailablePositive315135 - 31628643249.1
hypothetical proteinVSAL_RS01615Not AvailablePositive316319 - 31700525648.0
hypothetical proteinVSAL_RS01620Not AvailablePositive317174 - 31769818831.2
hypothetical proteinVSAL_RS01625Not AvailablePositive317676 - 31861734351.2
yjbh domain-containing proteinVSAL_RS01630P32689Negative318954 - 32116183255.3
capsule biosynthesis gfcc family proteinVSAL_RS22285Not AvailableNegative321164 - 32192228162.7
yjbf family lipoproteinVSAL_RS01640P75884Negative321935 - 32260024929.0

Displaying genes 441 – 450 of 4514 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.