Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Vibrionales
Family	Vibrionaceae
Genus	Aliivibrio
Species	Aliivibrio salmonicida
Strain	LFI1238

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	No
Flagellar presence	Yes
Number of membranes	2

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Facultative
Optimal temperature	Not Available
Temperature range	Psychrophilic
Habitat	Aquatic
Biotic relationship	Free living
Host(s)	Gadus morhua
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Heterotroph
Pathogenicity	No

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
is66 family insertion sequence element accessory protein tnpa	VSAL_RS01350	Not Available	Negative	256895 - 257209	11871.4
heme biosynthesis hemy n-terminal domain-containing protein	VSAL_RS01355	P44772	Negative	257294 - 258475	44654.7
uroporphyrinogen-iii c-methyltransferase	VSAL_RS01360	P09127	Negative	258472 - 259686	45087.0
uroporphyrinogen-iii synthase	VSAL_RS01365	P09126	Negative	259699 - 260445	27702.0
hydroxymethylbilane synthase	VSAL_RS01370	B6EPK1	Negative	260447 - 261382	33830.8
class i adenylate cyclase	VSAL_RS01375	P30528	Positive	261640 - 264150	96842.0
dna helicase ii	VSAL_RS01380	P03018	Positive	264252 - 266456	83408.0
eama family transporter rard	VSAL_RS01385	Q9KVF1	Negative	267419 - 268336	33713.3
atp-dependent dna helicase recq	VSAL_RS01390	P15043	Positive	268514 - 270349	68846.9
duf3630 family protein	VSAL_RS01395	Not Available	Positive	270353 - 270643	11082.1