Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mate family efflux transporterVSAL_RS01300B5FFE3Negative247650 - 24829022842.6
ribonuclease phVSAL_RS01305B6EPI9Negative248525 - 24924125587.8
yicc/yloc family endoribonucleaseVSAL_RS01310P23839Positive249413 - 25027633022.4
phosphate-starvation-inducible protein psieVSAL_RS01315Not AvailableNegative250359 - 25078716327.6
guanylate kinaseVSAL_RS01320Q5E8P5Positive250943 - 25156623601.0
dna-directed rna polymerase subunit omegaVSAL_RS01325B6EPJ3Positive251679 - 25195110082.9
bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolaseVSAL_RS01330Q9KNM2Positive252018 - 25414779788.2
trna (guanosine(18)-2'-o)-methyltransferase trmhVSAL_RS01335Not AvailablePositive254408 - 25507924891.8
is66-like element isvsa2 family transposaseVSAL_RS01340Not AvailableNegative254992 - 25647956634.0
is66 family insertion sequence element accessory protein tnpbVSAL_RS01345Not AvailableNegative256551 - 25689813668.5

Displaying genes 381 – 390 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.