Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Vibrionales
Family	Vibrionaceae
Genus	Aliivibrio
Species	Aliivibrio salmonicida
Strain	LFI1238

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	No
Flagellar presence	Yes
Number of membranes	2

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Facultative
Optimal temperature	Not Available
Temperature range	Psychrophilic
Habitat	Aquatic
Biotic relationship	Free living
Host(s)	Gadus morhua
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Heterotroph
Pathogenicity	No

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
glycosyltransferase family 2 protein	VSAL_RS01150	Not Available	Negative	216890 - 217729	32060.4
dtdp-4-dehydrorhamnose 3,5-epimerase	VSAL_RS01155	Not Available	Negative	217730 - 218287	21185.9
mate family efflux transporter	VSAL_RS01160	Not Available	Negative	218298 - 219197	32342.2
glucose-1-phosphate thymidylyltransferase rfba	VSAL_RS01165	Not Available	Negative	219197 - 220081	32817.4
dtdp-glucose 4,6-dehydratase	VSAL_RS01170	Not Available	Negative	220081 - 221172	40921.8
duf3413 domain-containing protein	VSAL_RS01175	Not Available	Negative	221194 - 223032	69134.2
3-deoxy-d-manno-octulosonic acid kinase	VSAL_RS01180	Not Available	Negative	223080 - 223784	27401.3
glycosyltransferase family 9 protein	VSAL_RS01185	Not Available	Positive	224160 - 225230	39625.7
glycosyltransferase family 2 protein	VSAL_RS01190	Not Available	Positive	225230 - 226012	29636.3
glycosyltransferase family 4 protein	VSAL_RS01195	Not Available	Positive	226015 - 227043	38014.1