Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Vibrionales
Family	Vibrionaceae
Genus	Aliivibrio
Species	Aliivibrio salmonicida
Strain	LFI1238

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	No
Flagellar presence	Yes
Number of membranes	2

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Facultative
Optimal temperature	Not Available
Temperature range	Psychrophilic
Habitat	Aquatic
Biotic relationship	Free living
Host(s)	Gadus morhua
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Heterotroph
Pathogenicity	No

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
nucleotidyltransferase family protein	VSAL_RS01105	Not Available	Negative	207356 - 208414	39733.2
acetyltransferase	VSAL_RS01110	Not Available	Negative	208430 - 209074	22903.7
n-acetylneuraminate synthase	VSAL_RS01115	Not Available	Negative	209067 - 210140	38676.2
udp-n-acetylglucosamine 2-epimerase	VSAL_RS01120	Not Available	Negative	210148 - 211332	43367.9
legc family aminotransferase	VSAL_RS01125	Not Available	Negative	211370 - 212515	42184.3
udp-n-acetylglucosamine 4,6-dehydratase	VSAL_RS01130	Not Available	Negative	212539 - 213729	44981.0
hypothetical protein	VSAL_RS01135	Not Available	Negative	213847 - 214968	42943.3
dtdp-4-amino-4,6-dideoxygalactose transaminase	VSAL_RS01140	Not Available	Negative	214965 - 216107	42857.8
hypothetical protein	VSAL_RS01145	Not Available	Positive	216190 - 216648	17904.2
gnat family n-acetyltransferase	VSAL_RS24205	Not Available	Positive	216655 - 216903	9024.76