Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Vibrionales
Family	Vibrionaceae
Genus	Aliivibrio
Species	Aliivibrio salmonicida
Strain	LFI1238

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	No
Flagellar presence	Yes
Number of membranes	2

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Facultative
Optimal temperature	Not Available
Temperature range	Psychrophilic
Habitat	Aquatic
Biotic relationship	Free living
Host(s)	Gadus morhua
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Heterotroph
Pathogenicity	No

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
duf4311 domain-containing protein	VSAL_RS00810	Not Available	Negative	143787 - 144566	27442.1
duf4312 family protein	VSAL_RS00815	Not Available	Negative	144627 - 144923	11109.5
glycine-rich sfcgs family protein	VSAL_RS00820	Not Available	Negative	144926 - 145288	12636.3
transcriptional regulator	VSAL_RS00825	Not Available	Negative	145290 - 145637	13177.5
is982-like element isvsa6 family transposase	VSAL_RS00830	Not Available	Positive	145902 - 146783	33608.2
is66 family insertion sequence element accessory protein tnpa	VSAL_RS00835	Not Available	Positive	146904 - 147218	11871.4
is66 family insertion sequence element accessory protein tnpb	VSAL_RS00840	Not Available	Positive	147215 - 147562	13668.5
is66-like element isvsa2 family transposase	VSAL_RS00845	Not Available	Positive	147634 - 149121	56615.9
hypothetical protein	VSAL_RS00850	Not Available	Negative	149312 - 151078	65017.6
ecf-type sigma factor	VSAL_RS00855	Not Available	Negative	151287 - 151856	22289.2