Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is66 family insertion sequence element accessory protein tnpbVSAL_RS00460Not AvailableNegative72716 - 7306313668.5
is66 family insertion sequence element accessory protein tnpaVSAL_RS00465Not AvailableNegative73060 - 7337411871.4
trkh family potassium uptake proteinVSAL_RS00470E1V6K4Negative73430 - 7489953494.4
trk system potassium transporter trkaVSAL_RS23150P39448Negative74902 - 7627850474.9
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbVSAL_RS23155Q87KD3Negative76303 - 7758347778.1
methionyl-trna formyltransferaseVSAL_RS00485B5FCW7Negative77686 - 7863334483.3
peptide deformylaseVSAL_RS00490B6EP21Negative78654 - 7916318975.8
lysm peptidoglycan-binding domain-containing proteinVSAL_RS00495Not AvailablePositive79281 - 8034239876.8
dna-processing protein dpraVSAL_RS00500P30852Positive80351 - 8146039935.1
duf494 family proteinVSAL_RS00505B6EP24Positive81463 - 8193618289.9

Displaying genes 211 – 220 of 4514 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.