Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Vibrionales
Family	Vibrionaceae
Genus	Aliivibrio
Species	Aliivibrio salmonicida
Strain	LFI1238

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	No
Flagellar presence	Yes
Number of membranes	2

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Facultative
Optimal temperature	Not Available
Temperature range	Psychrophilic
Habitat	Aquatic
Biotic relationship	Free living
Host(s)	Gadus morhua
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Heterotroph
Pathogenicity	No

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
ardc family protein	VSAL_RS00210	P27190	Positive	22497 - 23489	37383.7
is91-like element isvsa9 family transposase	VSAL_RS00215	Not Available	Negative	23916 - 25109	46171.1
mbl fold metallo-hydrolase	VSAL_RS00220	Not Available	Positive	25189 - 26034	31066.3
class iv adenylate cyclase	VSAL_RS00230	O69199	Positive	26437 - 26988	21043.3
hypothetical protein	VSAL_RS00235	Not Available	Positive	27382 - 27747	13562.3
duf2007 domain-containing protein	VSAL_RS00240	Not Available	Positive	27776 - 28180	14729.8
duf2971 domain-containing protein	VSAL_RS00245	Not Available	Positive	28436 - 29215	29820.6
nyn domain-containing protein	VSAL_RS00250	B1N1A2	Positive	29602 - 30555	36700.8
isncy-like element isvsa17 family transposase	VSAL_RS00255	Not Available	Negative	30807 - 31769	36483.8
hypothetical protein	VSAL_RS00260	Not Available	Positive	32178 - 32456	10751.7