Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Vibrionales
Family	Vibrionaceae
Genus	Aliivibrio
Species	Aliivibrio salmonicida
Strain	LFI1238

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	No
Flagellar presence	Yes
Number of membranes	2

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Facultative
Optimal temperature	Not Available
Temperature range	Psychrophilic
Habitat	Aquatic
Biotic relationship	Free living
Host(s)	Gadus morhua
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Heterotroph
Pathogenicity	No

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
mate family efflux transporter	VSAL_RS22600	Not Available	Negative	13734 - 13883	5507.65
is91-like element isvsa9 family transposase	VSAL_RS00165	Not Available	Negative	14049 - 15239	46033.0
mate family efflux transporter	VSAL_RS00170	P50360	Negative	15321 - 16223	34615.6
is66 family insertion sequence element accessory protein tnpb	VSAL_RS00175	Not Available	Negative	16295 - 16642	13668.5
is66 family insertion sequence element accessory protein tnpa	VSAL_RS00180	Not Available	Negative	16639 - 16953	11871.4
chaperonin groel	VSAL_RS00185	Q5E8E6	Negative	17172 - 18809	57338.9
co-chaperone groes	VSAL_RS00190	B6ENX1	Negative	18902 - 19189	10159.3
is91-like element isvsa9 family transposase	VSAL_RS00195	Not Available	Negative	19716 - 20909	46090.0
hypothetical protein	VSAL_RS00200	Not Available	Positive	21269 - 21523	9827.82
hok/gef family protein	VSAL_RS00205	P16477	Negative	21614 - 21763	5329.75