Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane protein insertion efficiency factor yiddVSAL_RS22595Q9KVY3Negative3905 - 41629547.75
ribonuclease p protein componentVSAL_RS00120B6EP41Negative4129 - 448213627.4
50s ribosomal protein l34VSAL_RS00125B6EP42Negative4499 - 46335197.51
amino acid abc transporter atp-binding proteinVSAL_RS00130P54954Negative4820 - 555727053.8
amino acid abc transporter permeaseVSAL_RS00135P52625Negative5554 - 622524932.3
amino acid abc transporter substrate-binding proteinVSAL_RS00140P52626Negative6380 - 713227903.2
chromosomal replication initiator protein dnaaVSAL_RS00145B6EP46Positive7427 - 883352996.3
dna polymerase iii subunit betaVSAL_RS00150Q9KVX5Positive8866 - 997541269.4
dna replication/repair protein recfVSAL_RS00155B6EP48Positive9989 - 1106840960.1
dna topoisomerase (atp-hydrolyzing) subunit bVSAL_RS00160O51859Positive11086 - 1350390151.9

Displaying genes 141 – 150 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.