Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail fiber proteinVSAL_RS22300Not AvailablePositive1136992 - 113906474547.6
hypothetical proteinVSAL_RS05735Not AvailablePositive1139064 - 113950716833.1
Hypothetical proteinVSAL_RS05740Not AvailablePositive1139507 - 114040033070.4
Tail-collar fiber proteinVSAL_RS05745Not AvailablePositive1140397 - 114094520504.5
Hypothetical proteinVSAL_RS05750P51739Positive1140942 - 114256760209.4
Baseplate assembly protein vVSAL_RS05755Not AvailablePositive1142569 - 11427666621.02
AttrNot AvailableNot AvailablePositive1144511 - 1144524Not Available
fmn-binding protein miocVSAL_RS00105Q9KVY6Negative312 - 74615919.8
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeVSAL_RS00110Q5E8Z9Negative811 - 217849697.5
membrane protein insertase yidcVSAL_RS00115B6EP40Negative2277 - 390260630.5

Displaying genes 131 – 140 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.