Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional udp-sugar hydrolase/5'-nucleotidase ushaVSAL_RS04490Q8DFG4Positive887932 - 88959361190.4
Trna-proNot AvailableNot AvailablePositive889776 - 889852Not Available
duf411 domain-containing proteinVSAL_RS04500Not AvailableNegative889989 - 89042316153.3
cation transporterVSAL_RS04505Q9KPZ7Negative890523 - 89323196466.2
cu(i)-responsive transcriptional regulatorVSAL_RS04510Q8XD09Positive893319 - 89371714940.0
co-chaperone ybbnVSAL_RS04515P77395Negative893742 - 89459631596.8
sdr family oxidoreductaseVSAL_RS04520P0AFP5Negative894931 - 89575831074.8
tigr01777 family oxidoreductaseVSAL_RS04525P77775Negative895887 - 89679233230.5
phosphodiesteraseVSAL_RS04530P67097Positive896926 - 89748020312.5
mate family efflux transporterVSAL_RS04535Not AvailablePositive897606 - 89842731330.1

Displaying genes 1011 – 1020 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.