Maribacter sp. HTCC2170

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Maribacter

Description

Maribacter sp. (strain HTCC2170 / KCCM 42371) is a facultative aerobic, chemoorganotrophic Gram-negative bacterium isolated from surface waters at a depth of 10 meters using dilution-to-extinction culturing in the coastal area of Newport, Oregon. Maribacter sp. is predicted to contain carotenoid biosynthesis genes, including a beta-carotene hydroxylase, but the genome has no predicted photosynthetic genes or light-utilizing systems. It contains genes for nitrate reductase, nitrous oxide reductase, and nitric oxide reductase for denitrification, as well as sulfate reductase genes. Maribacter sp. possesses a set of genes coding for enzymes required to degrade high-molecularweight compounds and moves by gliding motility. (Adapted from PMID: 21037013). (HAMAP: MARSH)

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusMaribacter
SpeciesMaribacter sp. HTCC2170
StrainHTCC2170

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Maribacter sp. HTCC2170
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Maribacter sp. HTCC2170, complete sequence.

Gene Summary

Adenine Count

1228213 bp

Thymine Count

1209691 bp

Guanine Count

701267 bp

Cytosine Count

729133 bp

Genome Length

3868304 bp

Protein-coding Genes

3358 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf6268 family outer membrane beta-barrel proteinFB2170_RS02460Not AvailableNegative517248 - 51814133747.0
abc transporter permeaseFB2170_RS02465Not AvailableNegative518187 - 51952750108.9
abc transporter atp-binding proteinFB2170_RS02470Not AvailableNegative519520 - 52045535197.4
molecular chaperone dnajFB2170_RS02475Not AvailableNegative520635 - 52175940128.7
nucleotide exchange factor grpeFB2170_RS02480Not AvailableNegative521769 - 52232921236.4
tigr01777 family oxidoreductaseFB2170_RS02485Not AvailableNegative522472 - 52343435860.9
trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmdFB2170_RS02490Not AvailableNegative523556 - 52421825355.4
duf4920 domain-containing proteinFB2170_RS02495Not AvailableNegative524218 - 52472118527.4
branched-chain amino acid aminotransferaseFB2170_RS02500Not AvailablePositive524827 - 52589139836.5
nucleoside triphosphate pyrophosphohydrolase family proteinFB2170_RS02505Not AvailableNegative525919 - 52630514635.5

Displaying genes 491 – 500 of 3408 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.