Maribacter sp. HTCC2170

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Maribacter

Description

Maribacter sp. (strain HTCC2170 / KCCM 42371) is a facultative aerobic, chemoorganotrophic Gram-negative bacterium isolated from surface waters at a depth of 10 meters using dilution-to-extinction culturing in the coastal area of Newport, Oregon. Maribacter sp. is predicted to contain carotenoid biosynthesis genes, including a beta-carotene hydroxylase, but the genome has no predicted photosynthetic genes or light-utilizing systems. It contains genes for nitrate reductase, nitrous oxide reductase, and nitric oxide reductase for denitrification, as well as sulfate reductase genes. Maribacter sp. possesses a set of genes coding for enzymes required to degrade high-molecularweight compounds and moves by gliding motility. (Adapted from PMID: 21037013). (HAMAP: MARSH)

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusMaribacter
SpeciesMaribacter sp. HTCC2170
StrainHTCC2170

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Maribacter sp. HTCC2170
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Maribacter sp. HTCC2170, complete sequence.

Gene Summary

Adenine Count

1228213 bp

Thymine Count

1209691 bp

Guanine Count

701267 bp

Cytosine Count

729133 bp

Genome Length

3868304 bp

Protein-coding Genes

3358 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-thrNot AvailableNot AvailablePositive34175 - 34251Not Available
ribosome hibernation-promoting factor, hpf/yfia familyFB2170_RS00115Not AvailableNegative34353 - 3465511680.3
tyrosine-type recombinase/integraseFB2170_RS00120Not AvailableNegative34694 - 3558734483.8
30s ribosomal protein s21FB2170_RS00125Not AvailableNegative35690 - 358847731.56
acyl-coa dehydrogenase family proteinFB2170_RS00130Not AvailableNegative35954 - 3709341316.5
comea family dna-binding proteinFB2170_RS00135Not AvailableNegative37120 - 3801034294.4
alanine/glycine:cation symporter family proteinFB2170_RS00140Not AvailableNegative38022 - 3963256891.2
potassium channel family proteinFB2170_RS00145Not AvailableNegative39726 - 4073037108.6
pspc domain-containing proteinFB2170_RS17495Not AvailableNegative40735 - 409629052.3
duf2851 family proteinFB2170_RS00155Not AvailableNegative40972 - 4225549525.1

Displaying genes 21 – 30 of 3408 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.