Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryziphila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1094909 bp
Thymine Count
1097240 bp
Guanine Count
1926409 bp
Cytosine Count
1931046 bp
Genome Length
6049604 bp
Protein-coding Genes
5325 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrgb family protein | EJA05_RS03260 | Not Available | Positive | 677314 - 678030 | 25068.6 |
| lon peptidase substrate-binding domain-containing protein | EJA05_RS03265 | Not Available | Positive | 678040 - 678630 | 21672.4 |
| bifunctional deda family/phosphatase pap2 family protein | EJA05_RS03270 | Not Available | Negative | 678718 - 680034 | 47080.8 |
| dna-3-methyladenine glycosylase | EJA05_RS03275 | Not Available | Negative | 680038 - 680730 | 26019.9 |
| glutamate-5-semialdehyde dehydrogenase | EJA05_RS03280 | Not Available | Positive | 681028 - 682299 | 45781.9 |
| nicotinate-nucleotide adenylyltransferase | EJA05_RS03285 | Not Available | Positive | 682334 - 682960 | 23109.6 |
| ribosome silencing factor | EJA05_RS03290 | Not Available | Positive | 683005 - 683433 | 15907.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EJA05_RS03295 | Not Available | Positive | 683443 - 683910 | 17679.6 |
| penicillin-binding protein 2 | EJA05_RS03300 | Not Available | Positive | 683927 - 685825 | 70729.0 |
| rod shape-determining protein roda | EJA05_RS03305 | Not Available | Positive | 685864 - 686967 | 40294.1 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





