Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryziphila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1094909 bp
Thymine Count
1097240 bp
Guanine Count
1926409 bp
Cytosine Count
1931046 bp
Genome Length
6049604 bp
Protein-coding Genes
5325 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-carnitine dehydrogenase | EJA05_RS01640 | Not Available | Negative | 327242 - 328207 | 34553.4 |
| 3-keto-5-aminohexanoate cleavage protein | EJA05_RS01645 | Not Available | Negative | 328369 - 329256 | 31569.4 |
| choline abc transporter substrate-binding protein | EJA05_RS01650 | Not Available | Negative | 329425 - 330369 | 34601.5 |
| glxa family transcriptional regulator | EJA05_RS01655 | Not Available | Positive | 330516 - 331481 | 36033.6 |
| metallophosphoesterase | EJA05_RS01660 | Not Available | Positive | 331558 - 332646 | 40912.7 |
| lysozyme inhibitor lpri family protein | EJA05_RS01665 | Not Available | Negative | 332831 - 333232 | 14797.0 |
| dipeptidase | EJA05_RS01670 | Not Available | Positive | 333518 - 334495 | 35906.0 |
| duf5943 domain-containing protein | EJA05_RS01675 | Not Available | Positive | 334574 - 335104 | 19744.6 |
| dimethylglycine demethylation protein dgca | EJA05_RS01680 | Not Available | Positive | 335120 - 337180 | 75820.2 |
| dimethylglycine demethylation protein dgcb | EJA05_RS01685 | Not Available | Positive | 337378 - 339330 | 70729.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





