Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryziphila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1094909 bp
Thymine Count
1097240 bp
Guanine Count
1926409 bp
Cytosine Count
1931046 bp
Genome Length
6049604 bp
Protein-coding Genes
5325 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdf family co(ii)/ni(ii) efflux transporter dmef | EJA05_RS24670 | Not Available | Positive | 5283349 - 5284272 | 33283.4 |
| cupin domain-containing protein | EJA05_RS24675 | Not Available | Positive | 5284412 - 5284756 | 12922.5 |
| 3-hydroxyisobutyrate dehydrogenase | EJA05_RS24680 | Not Available | Negative | 5284970 - 5285860 | 30431.8 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | EJA05_RS24685 | Not Available | Negative | 5285871 - 5287397 | 54395.5 |
| lysr family transcriptional regulator | EJA05_RS24690 | Not Available | Positive | 5287531 - 5288478 | 35143.3 |
| hypothetical protein | EJA05_RS24695 | Not Available | Positive | 5288924 - 5289142 | 8217.73 |
| ompa family protein | EJA05_RS24700 | Not Available | Negative | 5289296 - 5289754 | 15971.0 |
| diguanylate cyclase domain-containing protein | EJA05_RS24705 | Not Available | Negative | 5289793 - 5291073 | 46698.0 |
| yfir family protein | EJA05_RS24710 | Not Available | Negative | 5291070 - 5291645 | 20402.7 |
| exodeoxyribonuclease v subunit alpha | EJA05_RS24715 | Not Available | Negative | 5291714 - 5293789 | 75457.8 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





