Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryziphila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1094909 bp
Thymine Count
1097240 bp
Guanine Count
1926409 bp
Cytosine Count
1931046 bp
Genome Length
6049604 bp
Protein-coding Genes
5325 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJA05_RS24110 | Not Available | Negative | 5161294 - 5161677 | 14334.2 |
| hypothetical protein | EJA05_RS24115 | Not Available | Negative | 5161717 - 5162085 | 14256.8 |
| rhs repeat-associated core domain-containing protein | EJA05_RS24120 | Not Available | Negative | 5162097 - 5166743 | 174698.0 |
| type vi secretion system tip protein vgrg | EJA05_RS24125 | Not Available | Negative | 5166740 - 5169685 | 106077.0 |
| hcp family type vi secretion system effector | EJA05_RS24130 | Not Available | Negative | 5169770 - 5170288 | 19195.5 |
| tetratricopeptide repeat protein | EJA05_RS24135 | Not Available | Positive | 5170887 - 5172611 | 64258.9 |
| lipoprotein insertase outer membrane protein lolb | EJA05_RS24140 | Not Available | Positive | 5172614 - 5173231 | 22995.4 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | EJA05_RS24145 | Not Available | Positive | 5173238 - 5174098 | 31081.1 |
| Trna-gln | Not Available | Not Available | Positive | 5174119 - 5174193 | Not Available |
| ribose-phosphate pyrophosphokinase | EJA05_RS24155 | Not Available | Positive | 5174241 - 5175182 | 34208.3 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





