Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryziphila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1094909 bp
Thymine Count
1097240 bp
Guanine Count
1926409 bp
Cytosine Count
1931046 bp
Genome Length
6049604 bp
Protein-coding Genes
5325 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-1 | EJA05_RS17950 | Not Available | Positive | 3820813 - 3821031 | 8303.06 |
| atp-dependent clp protease atp-binding subunit clpa | EJA05_RS17955 | Not Available | Negative | 3821162 - 3823432 | 83339.8 |
| atp-dependent clp protease adapter clps | EJA05_RS17960 | Not Available | Negative | 3823463 - 3823837 | 14103.8 |
| cold shock domain-containing protein cspd | EJA05_RS17965 | Not Available | Positive | 3824068 - 3824331 | 9019.56 |
| nadp-dependent isocitrate dehydrogenase | EJA05_RS17970 | Not Available | Negative | 3824405 - 3825661 | 45540.0 |
| nadp-dependent isocitrate dehydrogenase | EJA05_RS17975 | Not Available | Positive | 3826144 - 3828369 | 79847.5 |
| nudix hydrolase | EJA05_RS17980 | Not Available | Positive | 3828530 - 3828970 | 16601.7 |
| trna 2-thiouridine(34) synthase mnma | EJA05_RS17985 | Not Available | Positive | 3829029 - 3830153 | 41651.4 |
| high frequency lysogenization protein hfld | EJA05_RS17990 | Not Available | Positive | 3830150 - 3830770 | 22904.9 |
| adenylosuccinate lyase | EJA05_RS17995 | Not Available | Positive | 3830913 - 3832283 | 50545.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





