Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryziphila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1094909 bp
Thymine Count
1097240 bp
Guanine Count
1926409 bp
Cytosine Count
1931046 bp
Genome Length
6049604 bp
Protein-coding Genes
5325 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | EJA05_RS15735 | Not Available | Positive | 3384296 - 3384625 | 12278.4 |
| mate family efflux transporter | EJA05_RS15740 | Not Available | Negative | 3384613 - 3385983 | 48085.4 |
| tetr/acrr family transcriptional regulator | EJA05_RS15745 | Not Available | Positive | 3386087 - 3386680 | 21634.0 |
| glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenase | EJA05_RS15760 | Not Available | Positive | 3387299 - 3389716 | 85203.4 |
| carbohydrate porin | EJA05_RS15765 | Not Available | Positive | 3389827 - 3391086 | 45605.6 |
| acetylornithine deacetylase | EJA05_RS15770 | Not Available | Negative | 3391214 - 3392374 | 41307.4 |
| duf1028 domain-containing protein | EJA05_RS15775 | Not Available | Negative | 3392367 - 3393044 | 23378.8 |
| flavin-containing monooxygenase | EJA05_RS15780 | Not Available | Positive | 3393359 - 3394675 | 48281.8 |
| rida family protein | EJA05_RS15785 | Not Available | Positive | 3394675 - 3395091 | 15289.4 |
| lysr family transcriptional regulator | EJA05_RS15790 | Not Available | Negative | 3395171 - 3396076 | 33497.5 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





