Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryziphila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1094909 bp
Thymine Count
1097240 bp
Guanine Count
1926409 bp
Cytosine Count
1931046 bp
Genome Length
6049604 bp
Protein-coding Genes
5325 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | EJA05_RS12915 | Not Available | Negative | 2779610 - 2780401 | 29853.8 |
| apc family permease | EJA05_RS12920 | Not Available | Positive | 2780600 - 2781964 | 47829.5 |
| p1 family peptidase | EJA05_RS12925 | Not Available | Positive | 2781982 - 2783097 | 38851.5 |
| mfs transporter | EJA05_RS12930 | Not Available | Negative | 2783254 - 2784582 | 47557.1 |
| sugar diacid recognition domain-containing protein | EJA05_RS12935 | Not Available | Positive | 2784746 - 2785843 | 40937.8 |
| metal-dependent hydrolase | EJA05_RS12940 | Not Available | Positive | 2785876 - 2786961 | 39999.8 |
| lysr family transcriptional regulator | EJA05_RS12945 | Not Available | Positive | 2787029 - 2787940 | 33828.5 |
| llm class flavin-dependent oxidoreductase | EJA05_RS12950 | Not Available | Positive | 2788152 - 2789132 | 35353.4 |
| cold-shock protein | EJA05_RS12955 | Not Available | Positive | 2789269 - 2789481 | 7707.03 |
| cold shock domain-containing protein | EJA05_RS12960 | Not Available | Positive | 2789532 - 2789756 | 7833.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





