Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryziphila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1094909 bp
Thymine Count
1097240 bp
Guanine Count
1926409 bp
Cytosine Count
1931046 bp
Genome Length
6049604 bp
Protein-coding Genes
5325 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside deaminase | EJA05_RS12420 | Not Available | Positive | 2658709 - 2659167 | 16433.5 |
| cyanate transporter | EJA05_RS12425 | Not Available | Positive | 2659164 - 2660357 | 41469.1 |
| plp-dependent aminotransferase family protein | EJA05_RS12430 | Not Available | Negative | 2660350 - 2661783 | 52423.3 |
| hypothetical protein | EJA05_RS12435 | Not Available | Negative | 2661877 - 2662215 | 12646.1 |
| flavin reductase family protein | EJA05_RS12440 | Not Available | Positive | 2662451 - 2663032 | 21354.2 |
| duf899 domain-containing protein | EJA05_RS12445 | Not Available | Negative | 2663043 - 2663771 | 27479.8 |
| had family hydrolase | EJA05_RS12450 | Not Available | Negative | 2664298 - 2664957 | 24056.7 |
| transcriptional repressor lexa | EJA05_RS12455 | Not Available | Positive | 2665051 - 2665668 | 23005.8 |
| translesion dna synthesis-associated protein imua | EJA05_RS12460 | Not Available | Positive | 2665668 - 2666279 | 21808.3 |
| y-family dna polymerase | EJA05_RS12465 | Not Available | Positive | 2666286 - 2667704 | 52260.1 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





