Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryziphila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1094909 bp
Thymine Count
1097240 bp
Guanine Count
1926409 bp
Cytosine Count
1931046 bp
Genome Length
6049604 bp
Protein-coding Genes
5325 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | EJA05_RS12270 | Not Available | Positive | 2629412 - 2629930 | 19767.8 |
| anti-sigma factor family protein | EJA05_RS12275 | Not Available | Positive | 2629927 - 2630679 | 27659.1 |
| abc transporter atp-binding protein | EJA05_RS12280 | Not Available | Negative | 2631762 - 2632910 | 41575.1 |
| abc transporter permease | EJA05_RS12285 | Not Available | Negative | 2632930 - 2633739 | 29189.9 |
| abc transporter permease | EJA05_RS12290 | Not Available | Negative | 2633746 - 2634663 | 33212.8 |
| abc transporter substrate-binding protein | EJA05_RS12295 | Not Available | Negative | 2634660 - 2635685 | 37079.9 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | EJA05_RS12300 | Not Available | Negative | 2636023 - 2637144 | 40448.6 |
| duf1330 domain-containing protein | EJA05_RS12305 | Not Available | Positive | 2637223 - 2637516 | 10955.9 |
| terc family protein | EJA05_RS12310 | Not Available | Negative | 2637629 - 2638618 | 36973.3 |
| tonb-dependent siderophore receptor | EJA05_RS12315 | Not Available | Positive | 2638944 - 2641178 | 81813.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





